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Report for CCDS31284.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31284.1 Public Homo sapiens 10 MXI1 24 110 108 CCDS HistoryNCBI Gene:4601Re-query CCDS DB by CCDS ID:31284.1Re-query CCDS DB by GeneID:4601See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31284.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361248.8 ENSP00000354606.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000361248.8Link to Ensembl Protein Viewer:ENSP00000354606.4Re-query CCDS DB by Nucleotide ID:ENST00000361248Re-query CCDS DB by Protein ID:ENSP00000354606
Original member Current member EBI ENST00000652604.1 ENSP00000498971.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000652604.1Link to Ensembl Protein Viewer:ENSP00000498971.1Re-query CCDS DB by Nucleotide ID:ENST00000652604Re-query CCDS DB by Protein ID:ENSP00000498971
Original member Current member NCBI NM_001008541.1 NP_001008541.1 Accepted alive Link to Nucleotide Sequence:NM_001008541.1Link to Protein Sequence:NP_001008541.1Re-query CCDS DB by Nucleotide ID:NM_001008541Re-query CCDS DB by Protein ID:NP_001008541Link to BLAST:NP_001008541.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001008541.1 182 P50539-4 182 100% 0 0

Chromosomal Locations for CCDS 31284.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 110228224 110228321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 110279180 110279294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 110279914 110280085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 110284824 110284987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (549 nt):
ATGCCGAGCCCCCGACTGCAGCATTCAAAGCCCCCACGGAGGTTGAGCCGGGCACAGAAACACAGCAGCG
GGAGCAGCAACACCAGCACTGCCAACAGACGAGCTCATCTGCGCCTTTGTTTAGAACGCTTAAAAGTTCT
GATTCCACTAGGACCAGACTGCACCCGGCACACAACACTTGGTTTGCTCAACAAAGCCAAAGCACACATC
AAGAAACTTGAAGAAGCTGAAAGAAAAAGCCAGCACCAGCTCGAGAATTTGGAACGAGAACAGAGATTTT
TAAAGTGGCGACTGGAACAGCTGCAGGGTCCTCAGGAGATGGAACGAATACGAATGGACAGCATTGGATC
AACTATTTCTTCAGATCGTTCTGATTCAGAGCGAGAGGAGATTGAAGTGGATGTTGAAAGCACAGAGTTC
TCCCATGGAGAAGTGGACAATATAAGTACCACCAGCATCAGTGACATTGATGACCACAGCAGCCTGCCGA
GTATTGGGAGTGACGAGGGTTACTCCAGTGCCAGTGTCAAACTTTCATTCACTTCATAG

Translation (182 aa):
MPSPRLQHSKPPRRLSRAQKHSSGSSNTSTANRRAHLRLCLERLKVLIPLGPDCTRHTTLGLLNKAKAHI
KKLEEAERKSQHQLENLEREQRFLKWRLEQLQGPQEMERIRMDSIGSTISSDRSDSEREEIEVDVESTEF
SHGEVDNISTTSISDIDDHSSLPSIGSDEGYSSASVKLSFTS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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